Best Payroll Services in San Francisco, CA

24 companies listed · 13 in San Francisco · 1 open 24/7 · 3 open weekends · 18 rated 4.5+

Data verified October 21, 2026

Flex Tax and Consulting Group

Flex Tax and Consulting Group

(49)
  • Questions
  • Email
  • Season
“This is my second year filing taxes with flextax and just like the first year had a very decent experience as they are quick to respond and help and always willing do an extra mile for you.”
Transparent Fees & Pricing
In Business Since 2019
Free Initial Consultation
1160 Battery St suite 100, San Francisco, CA
i
Bridgewater Certified Public Accountants

Bridgewater Certified Public Accountants

(23)
  • Questions
  • Team
  • Personal Finance
“Bridgewater was recommended to me by an existing client, after discussions with a previous firm left me bewildered about what should have been a straightforward business filing and structuring.”
BBB Accredited
Offers Financing Options
In Business Since 2004
Accepts All Major Credit Cards
San Rafael, CA · 17 mi from San Francisco
i
B.o.l. Global

B.o.l. Global

(37)
  • Feel
  • Prices
  • Phone
“I have been working with Ling for 3 years with filling my taxes, she always makes sure to take a comprehensive look at everything and maximum money back, she gives us excellent advice on how to process and what to do in the upcoming year and we are a...”
Accepts Check
Free Initial Consultation
In Business Since 2000
Transparent Fees & Pricing
2830 Geary Blvd, San Francisco, CA
i
Bleske & Associates

Bleske & Associates

(35)
  • Communication
  • Documents
  • Advice
“I found Andreas while I was stressed out, seeking a tax expert who was knowledgeable and willing to deal with an unexpected and costly tax penalty imposed on me by the IRS.”
Accepts All Major Credit Cards
In Business Since 2009
Transparent Fees & Pricing
San Ramon, CA · 28 mi from San Francisco
i
Duan Wei-Maynez CPA

Duan Wei-Maynez CPA

BBB Rating: A+
In Business Since 2009
Transparent Fees & Pricing
870 Market St #723, San Francisco, CA
i
Accounting For TAX

Accounting For TAX

(2)
“John knew what he was doing and helped me get a substantial tax return this year as well as help me get a potentially really good tax return for my previous year, something my previous CPA completely missed.”
BBB Accredited
In Business Since 2011
Accepts All Major Credit Cards
San Mateo, CA · 16 mi from San Francisco
i

The 24 companies listed for San Francisco, CA run payroll, filings and timekeeping for employers. Service and software details are taken from each provider's own website; ratings and quotes come from public reviews.

Area overview: San Francisco, CA

13 of the 24 companies we list are based in San Francisco; the other 11 serve San Francisco from towns including San Rafael (17 mi), San Ramon (28 mi) and San Bruno (3 mi). The companies on this page are rated from 3.9 to 5.0 across 351 reviews; 1 has 50 or more reviews and 18 are rated 4.5 or higher. When clients rate these companies on specific qualities, they most often praise responsiveness (94%), professionalism (86%) and quality (64%). 1 is open around the clock; 3 are open on Saturdays and 1 on Sundays. The services the companies on this page list most often on their websites are business services (3), payroll (3), tax services (3), bank financing (2) and bookkeeping (2). 3 show a license on their websites and 5 have a BBB rating of A or A+. 18 have ten or more years of experience, the longest 49 years. 1 offers urgent consultations; 2 offer payment plans; 4 offer a free initial consultation and 3 are family- or locally-owned. 2 have Spanish-speaking staff. We count these figures across the companies on this page; distances are straight-line, and hours and prices change, so confirm the details with the company before you book a consultation.

Which payroll companies listed for San Francisco publish service details?

All 24 companies on this page have a website on file. Most list the platforms they run and whether timekeeping, benefits administration and human resources support are sold alongside payroll. Everything stated there is the company's own description.

Books IN Balance

Books IN Balance

(8)
  • Skilled
  • Team
“In the beginning they took the entire back end of the office and reworked everything from overseeing a server installation, added new accounting software, and other resources for better management.”
BBB Rating: A+
In Business Since 2007
San Rafael, CA · 17 mi from San Francisco
i
Sfbay Financial

Sfbay Financial

(5)
  • Small Business
  • Company
“They have also made great suggestions regarding updating our payroll services, ensured we are always in compliance with state requirements etc and found ways for us to save money as a small business.”
Free Initial Consultation
In Business Since 2006
Family Business
201 Spear St # 1100, San Francisco, CA
i
Momentum Accounting

Momentum Accounting

(13)
  • Bookkeeping
  • Team
  • CFO
“I've been working with Nikole and her team for years and would recommend her to anyone looking to understand their business more, get control over their books and have a one stop shop for all accounting and tax needs.”
Emergency Services
In Business Since 2020
Transparent Fees & Pricing
530 Divisadero St PMB 767, San Francisco, CA
i
Cove Professional Services

Cove Professional Services

(11)
  • Financial
“My experience from the day we made first contact has been nothing but the best, The staff at Cove has always kept me updated and always explained everything in detail to include options.”
In Business Since 2017
San Ramon, CA · 28 mi from San Francisco
i
Sunrise Tax Pro Services

Sunrise Tax Pro Services

(21)
  • Travel
  • Team
“My name is Ajit I've been using Sunrise Tax for five years now I don't have any words this guy so good he knows what he's doing and I never turn around to go to see somebody else thank you so much Tomas you are a rock keep your good work”
Licensed
In Business Since 2014
San Jose, CA · 45 mi from San Francisco
i
H&C Enterprise

H&C Enterprise

(7)
“I've moved several times, further and further, but keep coming back because they are very nice and professional.”
Licensed
In Business Since 2004
Accepts All Major Credit Cards
Se Habla Español
3015 22nd St, San Francisco, CA
i
Lindi TAX Services

Lindi TAX Services

(9)
“He helped me so much and knew how to handle things that H&R Block people had no idea how to handle.”
Licensed
In Business Since 2020
1475 Polk St #12, San Francisco, CA
i
Hager Accounting

Hager Accounting

(9)
“If you own LLC or S or C corporations and want to logically invest your money, she can help you to start your business and save your money.”
Accepts All Major Credit Cards
In Business Since 2014
315 Montgomery St 10th Floor, San Francisco, CA
i
Stash Bookkeeping

Stash Bookkeeping

(1)
“Perfect Place for Bookkeeping Services”
In Business Since 2023
Market St, San Francisco, CA
i
Slim Accounting

Slim Accounting

(5)
“If you are a startup looking for the right accounting team, I highly recommend Slim Accounting.”
In Business Since 2016
156 2nd St, San Francisco, CA
i
Adm Systems

Adm Systems

(1)
“The best'”
Accepts Check
In Business Since 1984
Family Business
San Rafael, CA · 17 mi from San Francisco
i
A To Z Tax Services

A To Z Tax Services

(4)
“The first time I came in for a second opinion Aparachita pointed out where I was leaving money on the table and help me get more money back on my tax return”
In Business Since 2013
San Leandro, CA · 16 mi from San Francisco
i
Shea Labagh Dobberstein

Shea Labagh Dobberstein

(1)
“Loved the office”
Transparent Fees & Pricing
In Business Since 2006
Family Business
44 Montgomery St #3200, San Francisco, CA
i
Stanza Tax Services

Stanza Tax Services

(1)
“I felt like it was the first time someone actually cared about my concerns and helping me.”
Se Habla Español
In Business Since 2020
San Pablo, CA · 15 mi from San Francisco
i
Gonzalez and Associates Tax Preparation Services

Gonzalez and Associates Tax Preparation Services

(2)
“Staff are very kind and friendly, love it when i walk in every time to smiling faces.”
In Business Since 1988
5816 Mission St, San Francisco, CA
i
Larson Tax Associates

Larson Tax Associates

(4)
  • Company
“Jasmin and her staff were professional and knowledgeable, always on top of things and very responsive to questions and requests.”
Free Initial Consultation
In Business Since 1977
San Bruno, CA · 3 mi from San Francisco
i
Iworkglobal

Iworkglobal

(1)
“Thank you for making the hiring very easy”
In Business Since 2002
595 Market Street, 1275, 595 Market St, San Francisco, CA
i
Kendall Financial Services

Kendall Financial Services

(3)
“I would recommend to and small business.”
Accepts All Major Credit Cards
In Business Since 2003
Pinole, CA · 19 mi from San Francisco
i
HomePayroll CompaniesCaliforniaSan Francisco, CA

Why these companies made our list

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